Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015906179.1_cds_XP_016456377.1_50216
CDS Infomation

[gene=LOC107780367] [db_xref=GeneID:107780367] [protein=uncharacterized protein LOC107780367 isoform X3] [protein_id=XP_016456377.1] [location=join(14769..14805,15498..15904,16795..17238,18909..18987,19060..19265,19498..19582,19671..19931,20150..20302,20373..21019)] [gbkey=CDS]
Sequence

ATGGGTCAAAGGGAAATGGGTCCGACCCGGCAAGCAGGCTCATTGATGTTTAGTGTGGGA
GAGAATGTGGAAGTATCATTTGATAGTGAGGATCGCCGTGATGCTTGGTTTCCTTCAACT
GTCCTTGAACATTGTGGAAATAGCTCTTTTTTGGTGGAGAGCTATCGGCGAGCCTCTGAC
AAGAAGGCAATTGTTGAGAAAGTATTAGTTGATTCATTCCATATCCGACCTATTCCACCG
CGAATCGTAAACAAATTCAGCTTGCTGGAAAAAGTGGATGCCCTTTATGATTATGGCTGG
TGGAGTGGTGTCATCACAAGGGAGCTTGATGATAGTAGGTATATTGTCTTTTTTAAGCAC
ACAAACAAGGAGATGGAGTTGAACGACTCGGATTTGAGACCTCACATGGATTGGAAGGAT
GGGCAATGGTTTACTAACGCTCGGGAAGTTTCAATTCCTTCAGATTCTCAGACTAAGGGG
AGCAACAACTGCAATGACACTGGTATTTTACAAAAAGATGTTCCACTTGGAAAATCAACC
ATTATGAATGATATCTCTGAGGAAAGAACTCGACATTCTGCTAAGTCTATAGAGGATCCT
AATGAGAAACCTTCAACTGATGATATTTCACTGGAGAAGACATCGCAGAAGGCCCTTTCC
AGTTGTAATGCTGCTTCTTTGCAGGCCCAAGAGCTTCCCAAAGATGGAACTGAAACTCCA
AAAGCGTCACTTAAAGCATGTAAACTTAGTGCTAAGCCTTCTGAAACACCCTGTACAAAG
AGTCCCGCTGATTATCCCAGCCCAAATTCTGAATATGCTGAAACGAACATTTTAGCACCT
GTAGCTGGAGATGACCAGCCTGGTAATCACTCTTGGAAGAAAAGAACTAGGAAGAACTGC
CAGGAACTTGGTGAAGAAAAGGGCGAGACACTCGAGAAGTTGCAAGGTGCAAAATTTCCT
AAAAGAGGTAGCAAGGGAATTGCAATAGAAAATGCTGCTGAAATTACTCAAAAACTATCT
AAACGCAAAAAAGCTGATGTTCCTATCATCATGGGGCTGGAGTGTACTAAAGTTAGGAGC
TCTAGGACTAAAAGATCTCGGCAAATTGATAATGAATCTTTGGAGCCTATTGGGGATCAG
AAGCAGATTGATGCTGCCATAGATGGTATACAGGGGACCAAACAATTAGGCGATGGAGAC
AACACTCAGAAGAGAAAAAGGGGAAGGCCAGCAAGGAAACCAATTTCAGCCCCAACAGAT
ATGGGACCAAATGGAGATCATTCAAAAGATGAGAGCTCATGTCCTGTCGAGCTAGCAATT
ATGGTAAATGAAGATGGTAAAGAGCAACTAGAGGTTCAACTGGGGCATACCAGAAAAAGA
GGCAGGACAAGGAAGATGGCCGTAACAAAATTGTCAAATGAGAAAACAGGTCAGTCTTTG
TTCCAGCAGCATGAGAAGCATTATATAAAGCGGGGAAAGCGACAGACAGAAAGTGTAAAT
ATTGAATCTCAAGCTCAAGGTTCTGTTGACACTTCTGGAGTGAAAACTGCTGAATCAAAC
AGGATTGCAAGCGATGGTGAGGAAGTTTTTGCTGAATACAACAAATTAGATGATCAACCC
CTTGCAAAGTGGTTTGAAGAAATGCAGTCTCCAACTTCTGCTGATGGATCAAGAGTTGCA
CCTGCATGTGATACGGAGCAATGTGCTGAGATGAGGGAGAAACAAGACATGCCCATCCAA
ACTCCTGTCAGCGGGACCCCAACAACCCAAACTGAAACACAGAGCTTGCCTTTTATAAAA
GATTCAGATGTTTGGTCAATGTTTGAAACCATGGCTATTTTCCAGAAATTTCCGCAGAAG
CCCCACTTCCGTCCATTGGAACTCTGCAAAGAGAGTAAGCGTGAAGGACTAGCTATAGGT
TGTATGGTGACTTTTTCAAGCATTGCAGAGAAGACTTATAGATTGCACTTTGACGACTCC
AGAAGCGCTATTGAAGAAAAACTGGAGACTCTCAGCGACTTGGAAATGCATGGATTTGAA
GTGCAGCCTGTAAGAGATCAGTTAACTGTGTTGTTGTCGATGAAAGATAAGAAGGAAAAG
CTTGAATCACAGGCTGCAGATATTGGTAATCAGATTATCGCCCATAATACAGACAAAGAA
AAAATTGAACGAGAGATTGAAGAGAACAACAAACAAATAGCAGAATTACAGTGTAAAAAT
TCTGTGGCTATTTCAAAGAAGGAGGTTATGGATCGTGAAATTGACAGTTTGAGGTCTCAG
TTGGAGGATATTCAAGCAGACCTGAAGAAATGCACATAA

Peptide Sequence

PEP ID

XP_016456377.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107780367 isoform X3 [Nicotiana tabacum]
Sequence

MGQREMGPTRQAGSLMFSVGENVEVSFDSEDRRDAWFPSTVLEHCGNSSFLVESYRRASD
KKAIVEKVLVDSFHIRPIPPRIVNKFSLLEKVDALYDYGWWSGVITRELDDSRYIVFFKH
TNKEMELNDSDLRPHMDWKDGQWFTNAREVSIPSDSQTKGSNNCNDTGILQKDVPLGKST
IMNDISEERTRHSAKSIEDPNEKPSTDDISLEKTSQKALSSCNAASLQAQELPKDGTETP
KASLKACKLSAKPSETPCTKSPADYPSPNSEYAETNILAPVAGDDQPGNHSWKKRTRKNC
QELGEEKGETLEKLQGAKFPKRGSKGIAIENAAEITQKLSKRKKADVPIIMGLECTKVRS
SRTKRSRQIDNESLEPIGDQKQIDAAIDGIQGTKQLGDGDNTQKRKRGRPARKPISAPTD
MGPNGDHSKDESSCPVELAIMVNEDGKEQLEVQLGHTRKRGRTRKMAVTKLSNEKTGQSL
FQQHEKHYIKRGKRQTESVNIESQAQGSVDTSGVKTAESNRIASDGEEVFAEYNKLDDQP
LAKWFEEMQSPTSADGSRVAPACDTEQCAEMREKQDMPIQTPVSGTPTTQTETQSLPFIK
DSDVWSMFETMAIFQKFPQKPHFRPLELCKESKREGLAIGCMVTFSSIAEKTYRLHFDDS
RSAIEEKLETLSDLEMHGFEVQPVRDQLTVLLSMKDKKEKLESQAADIGNQIIAHNTDKE
KIEREIEENNKQIAELQCKNSVAISKKEVMDREIDSLRSQLEDIQADLKKCT

Transcript Sequence

Gene sequence data has not been registered.